Welcome to pyGCluster’s documentation!

Contents:

• 1. Introduction
  • 1.1. Algorithm Workflow
  • 1.2. General information
  • 1.3. Implementation
  • 1.4. Download
  • 1.5. Citation
  • 1.6. Installation
  • 1.7. References
• 2. Module pyGCluster
• 3. Usage
  • 3.1. Clustering
  • 3.2. Clustered data visualization
• 4. Example scripts
  • 4.1. Functionality check
  • 4.2. Testscripts to demonstrate pyGCluster
  • 4.3. Plot communities from a pyGCluster pkl
  • 4.4. Retrieve pyGCluster pkl info
  • 4.5. Plot simple expression map
  • 4.6. Nodemap and expression map example

Indices and tables

• Index
• Module Index
• Search Page